Slavica Jonic: Invited presentations

 


 

 

CECAM workshop [Link]

Paris, France, November 12-15, 2024

TBA

 

Final iNEXT-Discovery Consortium Meeting & 4th Symposium on Recent Advances in Cryo-EM  [Link]

Brno, Czech Republic, June 10-13, 2024

Hybrid methods for analyzing conformational variability in cryo-EM and cryo-ET data

 

IGBMC Seminar

Strasbourg, France, June 7, 2024

Hybrid methods for analyzing conformational variability in cryo-EM and cryo-ET data

 

5th International symposium on cryo-EM 3D image analysis [Link]

Lake Tahoe, CA, USA, March 13-16, 2024

Methods based on molecular dynamics simulations for extracting continuous conformational landscapes from single particle images (MDSPACE) and subtomograms (MDTOMO)

 

CZ Imaging Institute

San Francisco, CA, USA, March 12, 2024

Continuous conformational landscapes of biomolecules from cryo electron tomography data

 

Integrative Computational Biology workshop [Link]

Grenoble, France, February 12th – 14th, 2024

Hybrid methods for analyzing conformational variability in cryo-EM and cryo-ET data

 

Shapes seminar series  [YouTube]

Paris, France, Feb 7th, 2024

From cryo-EM data to continuous conformational landscapes

 

18th Congress of the French microscopy society

Rouen, France, July 3-7, 2023

Data analysis methods based on molecular dynamics simulation for studying continuous conformational variability

 

Gordon Research Conference on Three Dimensional Electron Microscopy [Link]

Session “New Algorithms and AI methods”

Newry, ME, USA, June 11−16, 2023

DeepHEMNMA: Extraction of Conformational Flexibility From cryo-EM Data by Combining Simulation, Image Analysis, and Deep Learning

 

Flatiron CryoEM Summer Workshop [Link]

New York, USA, June 8−9, 2023

Hybrid methods for analyzing biomolecular conformational dynamics: Integration of Dynamics Simulation into SPA/ET data processing and Deep Learning

 

Microscopy conference MC2023, organized by the German Society for Electron Microscopy [Link]

Session LS 4 “Image analysis of large data sets”

Darmstadt, Germany, February 26 - March 2, 2023

Analysis of continuous conformational heterogeneity in cryo-EM and cryo-ET

 

International Conference on Image Processing and Artificial Intelligence, organized by the School of Mathematics of Inner Mongolia University, Hohhot, China

Virtual, December 16-21, 2022

DeepHEMNMA approach for analyzing continuous conformational heterogeneity in single-particle cryo-EM images

 

MNHN (seminar SAD-ABI-PAM OMICS)

Paris, France, December 1, 2022

Analysis of continuous conformational heterogeneity in cryo-EM

 

ARC Centre for Cryo-EM of Membrane Proteins, The University of Melbourne [Link]

Melbourne, Australia, November 4, 2022

DeepHEMNMA approach for analyzing continuous conformational heterogeneity in single-particle cryo-EM images

 

SIAM Conference on Imaging Science [Link]

Virtual, March 21-25, 2022

Cryo Electron Microscopy Image Analysis of Continuous Conformational Variability of Biomolecules

 

Aviesan ITMO molecular and structural basis of life sciences: "Symposium on recent developments in cellular electron microscopy", Paris [Link]

Paris, France, March 21-22, 2022

Methods for cryo subtomogram analysis of continuous conformational heterogeneity of macromolecules

 

4th International Symposium on Cryo-EM 3D Image Analysis [Link]

Lake Tahoe, California, USA, 9-12 March, 2022

Non-classification-based methods for deciphering continuous conformational variability: Methods combining image analysis, molecular mechanics simulation, and machine learning

 

JOBIM 2021

Virtual - July 6-9, 2021

Cryo-EM studies of continuous conformational variability of biomolecules in vitro and in situ based on image analysis, simulation and deep learning

Instruct−ERIC I2PC seminar series [YouTube]

Virtual - April 15, 2021

HEMNMA and HEMNMA-3D for in vitro and in situ studies of continuous conformational variability of macromolecular complexes, ContinuousFlex plugin of Scipion

 

One World Cryo-EM seminar series [YouTube][OneWorld Cryo-EM]

Virtual, March 24, 2021 

Combining normal mode analysis, image analysis, and deep learning for in vitro and in situ studies of continuous conformational variability of macromolecular complexes

 

(Postponed due to COVID-19 epidemic) 4th International Conference on 3D Cryo-EM Image Analysis

Lake Tahoe, California, USA, March 18-21, 2020

 

Aviesan ITMO molecular and structural basis of life sciences: "Deciphering the Functional Mechanisms of Biological Macromolecules: Upcoming Challenges in Bioinformatics, Modelling and Experimental Validations",  BIOPARK, Paris [Link]

Paris, France, October 7-8, 2019

Combining cryo-EM image analysis and molecular mechanics simulation methods to study biomolecular conformational dynamics

 

Institut de Biologie Intégrative de la Cellule (I2BC)

Gif-sur-Yvette, France, May 10, 2019

Cryo-EM image analysis methods to study biomolecular conformational variability

 

Aviesan ITMO molecular and structural basis of life sciences: “How cryo Electron Microscopy meets chemical structure”, CNRS Paris Michel-Ange [Link]

Paris, France, November 14-15, 2018

Non-classification-based image analysis methods for deciphering continuous conformational changes of macromolecular complexes

 

Biology and Physics Faculties’ Symposium, Sorbonne Université, Campus Pierre & Marie Curie [Link]

Paris, France, October 19, 2017  

(Flash Talk) Deciphering continuous motions of biomolecules from cryo-electron microscopy images by a combined use of molecular mechanics simulation, image analysis, and machine learning

 

Centre de mathématiques et leurs applications (CMLA), ENS Cachan

Cachan, France, September 27, 2017

Electron Microscopy Image Analysis for Studying Structure and Dynamics of Biomolecular Complexes

 

Institute of Transformative Bio−Molecules, Nagoya University

Nagoya, Japan, February 20, 2017

Macromolecular Dynamics by Hybrid Electron Microscopy Normal Mode Analysis

 

2nd International Symposium on Cryo-EM 3D Image Analysis 2016 [Link]

Lake Tahoe, California, USA, March 30-April 2, 2016

StructMap: Elastic distance analysis of electron microscopy maps for studying conformational changes

 

Microscopy & Microanalysis 2014 [Link]

Hartford, Connecticut, USA, August 3-7, 2014

Macromolecular Dynamics by Hybrid Electron Microscopy Normal Mode Analysis

 

Cryo-EM 3D Image Analysis Symposium 2014 [Link]

Lake Tahoe, California, USA, March 12-15, 2014

HEMNMA: Hybrid Electron Microscopy Normal Mode Analysis to fully explore macromolecular dynamics

 

University of California San Francisco

San Francisco, USA, July 2, 2013

Hybrid method combining transmission electron microscopy and normal mode analysis of single particles for filming molecules in action

 

Gordon Research Conference on Three Dimensional Electron Microscopy [Link]

Colby−Sawyer College, New London, USA, June 23−28, 2013

Normal mode analysis for electron microscopy revitalized: filming molecules in action

 

Centro Nacional de Biotecnología – CSIC

Madrid, Spain, June 4, 2013

Normal mode analysis for electron microscopy revitalized: filming molecules in action

 

Laboratoire de Mathématiques de Bretagne Atlantique - UMR 6205

Campus de Tohannic, Vannes, France, February 9, 2012

Transmission electron microscopy image analysis to decipher structure and function of biomolecular complexes       

 

Laboratoire d'Enzymologie et Biochimie Structurales

Campus CNRS, Gif sur Yvette, France, March 18, 2011

Filming molecules in action using transmission electron microscopy: Novel image analysis methods for studying conformational changes in 4D

 

Unité de Virologie et Immunologie Moléculaires, INRA

Jouy en Josas, France, March 12, 2009

High-resolution three-dimensional cryo-transmission electron microscopy of macromolecular assemblies: Structural flexibility

 

Final Meeting of the Network of Excellence 3DEM

Brdo, Slovenia, February 9-13, 2009

Latest developments on hybrid methods for studying conformational variability and modeling

 

Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC)

Illkirch, France, February 13, 2008

Image analysis and processing methods for high-resolution 3D reconstruction from cryo-electron microscopy images of macromolecular assemblies: Methods for studying structural flexibility

 

4th Annual Meeting of the Network of Excellence 3DEM

Schloss Marbach, Germany, January 28-30, 2008

Progress on hybrid approaches for studying structural flexibility and for modeling

 

3rd Serbian Congress for Microscopy [Link]

Belgrade, Serbia, September 25-28, 2007

3D transmission electron microscopy of biological nanomachines

 

Gordon Research Conference on Three Dimensional Electron Microscopy

Il Ciocco, Italy, June 25-30, 2006

Improvement of visibility of diffraction rings for sorting micrographs and their local areas

 

2nd Annual Meeting of the Network of Excellence 3DEM

Klosters, Switzerland, January 11-14, 2006

Influence of noise level on the performance of 3D-2D alignment algorithms

 

 

Slavica Jonic    Modified 16/05/2024